Browsing by Author "Botnar, Rene M."
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- ItemArterial spin labeling angiography using a triple inversion recovery prepulse(WILEY-BLACKWELL, 2012) Andia, Marcelo E.; Botnar, Rene M.Arterial spin labeling is a well-known noninvasive angiography technique, which does not necessitate the use of a contrast agent. arterial spin labeling is still clinically underused because of several challenges: (1) long scan times because of the need for two acquisitions (labeled and nonlabeled datasets), (2) sensitivity to spatial misregistration because of the need for image subtraction, and (3) the need for precise planning and choice of an optimal inversion delay for best blood-to-background contrast. In this work, we propose a new arterial spin labeling method based on a triple-inversion-recovery sequence-arterial spin labeling. This approach exploits the ability of two nonselective inversion recovery prepulses to null the background signal over a wide range of T1 values, while maintaining the signal of labeled blood using a third slab selective inversion pulse. This technique therefore allows the acquisition of angiograms with a flexible inversion delay, easier planning procedure and no need for subtraction. Magn Reson Med, 2012. (C) 2011 Wiley Periodicals, Inc.
- ItemCongenital Heart Disease in Children: Coronary MR Angiography during Systole and Diastole with Dual Cardiac Phase Whole-Heart Imaging(RADIOLOGICAL SOC NORTH AMERICA, 2011) Uribe, Sergio; Hussain, Tarique; Valverde, Israel; Tejos, Cristian; Irarrazaval, Pablo; Fava, Mario; Beerbaum, Philipp; Botnar, Rene M.; Razavi, Reza; Schaeffter, Tobias; Greil, Gerald F.Purpose: To assess the optimal timing for coronary magnetic resonance (MR) angiography in children with congenital heart disease by using dual cardiac phase whole-heart MR imaging.
- ItemCoronary Magnetic Resonance Angiography in Chronic Coronary Syndromes(FRONTIERS MEDIA SA, 2021) Hajhosseiny, Reza; Munoz, Camila; Cruz, Gastao; Khamis, Ramzi; Kim, Won Yong; Prieto, Claudia; Botnar, Rene M.Cardiovascular disease is the leading cause of mortality worldwide, with atherosclerotic coronary artery disease (CAD) accounting for the majority of cases. X-ray coronary angiography and computed tomography coronary angiography (CCTA) are the imaging modalities of choice for the assessment of CAD. However, the use of ionising radiation and iodinated contrast agents remain drawbacks. There is therefore a clinical need for an alternative modality for the early identification and longitudinal monitoring of CAD without these associated drawbacks. Coronary magnetic resonance angiography (CMRA) could be a potential alternative for the detection and monitoring of coronary arterial stenosis, without exposing patients to ionising radiation or iodinated contrast agents. Further advantages include its versatility, excellent soft tissue characterisation and suitability for repeat imaging. Despite the early promise of CMRA, widespread clinical utilisation remains limited due to long and unpredictable scan times, onerous scan planning, lower spatial resolution, as well as motion related image quality degradation. The past decade has brought about a resurgence in CMRA technology, with significant leaps in image acceleration, respiratory and cardiac motion estimation and advanced motion corrected or motion-resolved image reconstruction. With the advent of artificial intelligence, great advances are also seen in deep learning-based motion estimation, undersampled and super-resolution reconstruction promising further improvements of CMRA. This has enabled high spatial resolution (1 mm isotropic), 3D whole heart CMRA in a clinically feasible and reliable acquisition time of under 10 min. Furthermore, latest super-resolution image reconstruction approaches which are currently under evaluation promise acquisitions as short as 1 min. In this review, we will explore the recent technological advances that are designed to bring CMRA closer to clinical reality.
- ItemEvaluation of accelerated motion-compensated 3d water/fat late gadolinium enhanced MR for atrial wall imaging(SPRINGER, 2021) Munoz, Camila; Sim, Iain; Neji, Radhouene; Kunze, Karl P.; Masci, Pier Giorgio; Schmidt, Michaela; O'Neill, Mark; Williams, Steven; Botnar, Rene M.; Prieto, ClaudiaObjective 3D late gadolinium enhancement (LGE) imaging is a promising non-invasive technique for the assessment of atrial fibrosis. However, current techniques result in prolonged and unpredictable scan times and high rates of non-diagnostic images. The purpose of this study was to compare the performance of a recently proposed accelerated respiratory motion-compensated 3D water/fat LGE technique with conventional 3D LGE for atrial wall imaging. Materials and methods 18 patients (age: 55.7 +/- 17.1 years) with atrial fibrillation underwent conventional diaphragmatic navigator gated inversion recovery (IR)-prepared 3D LGE (dNAV) and proposed image-navigator motion-corrected water/fat IR-prepared 3D LGE (iNAV) imaging. Images were assessed for image quality and presence of fibrosis by three expert observers. The scan time for both techniques was recorded. Results Image quality scores were improved with the proposed compared to the conventional method (iNAV: 3.1 +/- 1.0 vs. dNAV: 2.6 +/- 1.0, p = 0.0012, with 1: Non-diagnostic to 4: Full diagnostic). Furthermore, scan time for the proposed method was significantly shorter with a 59% reduction is scan time (4.5 +/- 1.2 min vs. 10.9 +/- 3.9 min, p < 0.0001). The images acquired with the proposed method were deemed as inconclusive less frequently than the conventional images (expert 1/expert 2: 4/7 dNAV and 2/4 iNAV images inconclusive). Discussion The motion-compensated water/fat LGE method enables atrial wall imaging with diagnostic quality comparable to the current conventional approach with a significantly shorter scan of about 5 min.
- ItemExtended MRI-based PET motion correction for cardiac PET/MRI(2024) Aizaz, Mueez; Van der Pol, Jochem A. J.; Schneider, Alina; Munoz, Camila; Holtackers, Robert J.; Van Cauteren, Yvonne; Van Langen, Herman; Meeder, Joan G.; Rahel, Braim M.; Wierts, Roel; Botnar, Rene M.; Prieto, Claudia; Moonen, Rik P. M.; Kooi, M. E.Purpose: A 2D image navigator (iNAV) based 3D whole-heart sequence has been used to perform MRI and PET non-rigid respiratory motion correction for hybrid PET/MRI. However, only the PET data acquired during the acquisition of the 3D whole-heart MRI is corrected for respiratory motion. This study introduces and evaluates an MRI-based respiratory motion correction method of the complete PET data. Methods Twelve oncology patients scheduled for an additional cardiac 18F-Fluorodeoxyglucose (18F-FDG) PET/MRI and 15 patients with coronary artery disease (CAD) scheduled for cardiac 18F-Choline (18F-FCH) PET/MRI were included. A 2D iNAV recorded the respiratory motion of the myocardium during the 3D whole-heart coronary MR angiography (CMRA) acquisition (~ 10 min). A respiratory belt was used to record the respiratory motion throughout the entire PET/MRI examination (~ 30–90 min). The simultaneously acquired iNAV and respiratory belt signal were used to divide the acquired PET data into 4 bins. The binning was then extended for the complete respiratory belt signal. Data acquired at each bin was reconstructed and combined using iNAV-based motion fields to create a respiratory motion-corrected PET image. Motion-corrected (MC) and non-motion-corrected (NMC) datasets were compared. Gating was also performed to correct cardiac motion. The SUVmax and TBRmax values were calculated for the myocardial wall or a vulnerable coronary plaque for the 18F-FDG and 18F-FCH datasets, respectively. Results A pair-wise comparison showed that the SUVmax and TBRmax values of the motion corrected (MC) datasets were significantly higher than those for the non-motion-corrected (NMC) datasets (8.2 ± 1.0 vs 7.5 ± 1.0, p < 0.01 and 1.9 ± 0.2 vs 1.2 ± 0.2, p < 0.01, respectively). In addition, the SUVmax and TBRmax of the motion corrected and gated (MC_G) reconstructions were also higher than that of the non-motion-corrected but gated (NMC_G) datasets, although for the TBRmax this difference was not statistically significant (9.6 ± 1.3 vs 9.1 ± 1.2, p = 0.02 and 2.6 ± 0.3 vs 2.4 ± 0.3, p = 0.16, respectively). The respiratory motion-correction did not lead to a change in the signal to noise ratio. Conclusion The proposed respiratory motion correction method for hybrid PET/MRI improved the image quality of cardiovascular PET scans by increased SUVmax and TBRmax values while maintaining the signal-to-noise ratio. Trial registration METC162043 registered 01/03/2017.
- ItemMRI-Guided Motion-Corrected PET Image Reconstruction for Cardiac PET/MRI(SOC NUCLEAR MEDICINE INC, 2021) Munoz, Camila; Ellis, Sam; Nekolla, Stephan G.; Kunze, Karl P.; Vitadello, Teresa; Neji, Radhouene; Botnar, Rene M.; Schnabel, Julia A.; Reader, Andrew J.; Prieto, ClaudiaSimultaneous PET/MRI has shown potential for the comprehensive assessment of myocardial health from a single examination. Furthermore, MRI-derived respiratory motion information, when incorporated into the PET image reconstruction, has been shown to improve PET image quality. Separately, MRI-based anatomically guided PET image reconstruction has been shown to effectively denoise images, but this denoising has so far been demonstrated mainly in brain imaging. To date, the combined benefits of motion compensation and anatomic guidance have not been demonstrated for myocardial PET/MRI. This work addressed this lack by proposing a single cardiac PET/MRI image reconstruction framework that fully utilizes MRI-derived information to allow both motion compensation and anatomic guidance within the reconstruction. Methods: Fifteen patients underwent an F-18-FDG cardiac PET/MRI scan with a previously introduced acquisition framework. The MRI data processing and image reconstruction pipeline produces respiratory motion fields and a high-resolution respiratory motion-corrected MR image with good tissue contrast. This MRI-derived information was then included in a respiratory motion-corrected, cardiac-gated, anatomically guided image reconstruction of the simultaneously acquired PET data. Reconstructions were evaluated by measuring myocardial contrast and noise and were compared with images from several comparative intermediate methods using the components of the proposed framework separately. Results: Including respiratory motion correction, cardiac gating, and anatomic guidance significantly increased contrast. In particular, myocardiumto-blood pool contrast increased by 143% on average (P < 0.0001), compared with conventional uncorrected, non-guided PET images. Furthermore, anatomic guidance significantly reduced image noise, by 16.1%, compared with nonguided image reconstruction (P < 0.0001). Conclusion: The proposed framework for MRI-derived motion compensation and anatomic guidance of cardiac PET data significantly improved image quality compared with alternative reconstruction methods. Each component of the reconstruction pipeline had a positive impact on the final image quality. These improvements have the potential to improve clinical interpretability and diagnosis based on cardiac PET/MR images.
- ItemNoninvasive Magnetic Resonance Imaging Evaluation of Endothelial Permeability in Murine Atherosclerosis Using an Albumin-Binding Contrast Agent(LIPPINCOTT WILLIAMS & WILKINS, 2012) Phinikaridou, Alkystis; Andia, Marcelo E.; Protti, Andrea; Indermuchle, Andreas; Shah, Ajay; Smith, Alberto; Warley, Alice; Botnar, Rene M.Backgound-Endothelial dysfunction promotes atherosclerosis and precedes acute cardiovascular events. We investigated wether in vivo magnetic resonance imaging with the use of an albumin-binding contrast agent, gadofosveset, could detect endothelial damage associated with atherosclerosis in apolipoprotein E-deficient (ApoE(-/-)) mice. Furthermore, we tested whether magnetic resonance imaging could noninvasively assess endothelial function by measuring the endothelial-dependent vasolidation in response to acetycholine.
- ItemSelf-supervised learning-based diffeomorphic non-rigid motion estimation for fast motion-compensated coronary MR angiography(ELSEVIER SCIENCE INC, 2022) Munoz, Camila; Qi, Haikun; Cruz, Gastao; Kuestner, Thomas; Botnar, Rene M.; Prieto, ClaudiaPurpose: To accelerate non-rigid motion corrected coronary MR angiography (CMRA) reconstruction by developing a deep learning based non-rigid motion estimation network and combining this with an efficient implementation of the undersampled motion corrected reconstruction.
- ItemSimultaneous T-1, T-2, and T-1 rho cardiac magnetic resonance fingerprinting for contrast agent-free myocardial tissue characterization(WILEY, 2021) Velasco, Carlos; Cruz, Gastao; Lavin, Begona; Hua, Alina; Fotaki, Anastasia; Botnar, Rene M.; Prieto, ClaudiaPurpose: To develop a simultaneous T-1, T-2, and T-1 rho cardiac magnetic resonance fingerprinting (MRF) approach to enable comprehensive contrast agent-free myocardial tissue characterization in a single breath-hold scan.
- ItemWhole-heart non-rigid motion corrected coronary MRA with autofocus virtual 3D iNAV(ELSEVIER SCIENCE INC, 2022) Schneider, Alina; Cruz, Gastao; Munoz, Camila; Hajhosseiny, Reza; Kuestner, Thomas; Kunze, Karl P.; Neji, Radhouene; Botnar, Rene M.; Prieto, ClaudiaPurpose: Respiratory motion-corrected coronary MR angiography (CMRA) has shown promise for assessing coronary disease. By incorporating coronal 2D image navigators (iNAVs), respiratory motion can be corrected for in a beat-to-beat basis using translational correction in the foot-head (FH) and right-left (RL) directions and in a bin-to-bin basis using non-rigid motion correction addressing the remaining FH, RL and anterior-posterior (AP) motion. However, with this approach beat-to-beat AP motion is not corrected for. In this work we investigate the effect of remaining beat-to-beat AP motion and propose a virtual 3D iNAV that exploits autofocus motion correction to enable beat-to-beat AP and improved RL intra-bin motion correction. Methods: Free-breathing 3D whole-heart CMRA was acquired using a 3-fold undersampled variable-density Cartesian trajectory. Beat-to-beat 3D translational respiratory motion was estimated from the 2D iNAVs in FH and RL directions, and in AP direction with autofocus assuming a linear relationship between FH and AP movement of the heart. Furthermore, motion in RL was also refined using autofocus. This virtual 3D (v3D) iNAV was incorporated in a non-rigid motion correction (NRMC) framework. The proposed approach was tested in 12 cardiac patients, and visible vessel length and vessel sharpness for the right (RCA) and left (LAD) coronary arteries were compared against 2D iNAV-based NRMC. Results: Average vessel sharpness and length in v3D iNAV NRMC was improved compared to 2D iNAV NRMC (vessel sharpness: RCA: 56 +/- 1% vs 52 +/- 11%, LAD: 49 +/- 8% vs 49 +/- 7%; visible vessel length: RCA: 5.98 +/- 1.37 cm vs 5.81 +/- 1.62 cm, LAD: 5.95 +/- 1.85 cm vs 4.83 +/- 1.56 cm), however these improvements were not statistically significant. Conclusion: The proposed virtual 3D iNAV NRMC reconstruction further improved NRMC CMRA image quality by reducing artefacts arising from residual AP motion, however the level of improvement was subject-dependent.